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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902670.1_cds_XP_016452708.1_46915
CDS Infomation

[gene=LOC107777234] [db_xref=GeneID:107777234] [protein=geranylgeranyl transferase type-1 subunit beta isoform X2] [protein_id=XP_016452708.1] [location=complement(join(39255..39404,42060..42184,43588..43633,44167..44243,44324..44379,45870..46009,46116..46174,46272..46347,47417..47629))] [gbkey=CDS]
Sequence

ATGGCGGAGGAAGATGATGAATTTCGGAGCTTAACCGATCCAGAATCTGACCCGGATTCA
ATCCCTATGTTCTTCGATAGAAATCGGCATATTTGCTATTTAGAGATGATGCTGGAACTC
ATACCTTCACCTTATCAATCGCAAGAGATCAATCGCCTCACTCTCGCTTACTTCGCCATC
TCCGGTCTCGACATCCTACGCGCCCTCGATCGCGTTGACAAAGAAGGGGTGATTAATTGG
GTTTTATCACTGCAAGCTCATCCACGAGATGAAGCTGAATTGAGCAATGGACAATTTTAT
GGGTTCCATGGTTCTAGGAGTTCTCAATTTCAATCGAATGAAAATGGGGATGCAATCCCC
AATGGCAGTCATTTGGCAAGTACTTACTGCGCGCTATCCATATTGAAGACCCTTGGCTAT
GACTTTTCACTGCTGGATTCCACATCAATCCTCAAATCAATGAAAAATCTTCAGCAACCT
GATGGGAGCTTTATGCCCATTCATAGCGGGGCAGAGACAGACCTCCGCTTTGTATATTGT
GCAGCTGCAATCTCTTCCATGTTGGAAAACTGGAGTGGCATTGACAAGGAGAAAGCCAAA
GAGTACATTATAAACTGTCAGTCATACGATGGTGGTTTTGGTTTAACTCCTGGTTCAGAA
TCACATGGTGGTGCCACTTATTGTGCGGTTGCTTCTCTCAAATTGATGGGATTAATTGAA
GATGATATATTGTCGAAGAGTGTATCCTCTTGCTTCATAAATGTGCCCATGCTTCTAGAC
TGGAGTTTACAGTATGGTGGTTTTGGTAAAATTCCGGAGCAGCTGCCAGATCTTTATCAC
GCCTACTATGGCTTTTGCGCATTTAGCCTGTTAGGGGAAGCTGACCTCAGTTCATTCTGC
GTTGAACTGGGTATAACCAATGGTGCATGCACTAGACTTTGA

Peptide Sequence

PEP ID

XP_016452708.1
PEP Infomation

PREDICTED: geranylgeranyl transferase type-1 subunit beta isoform X2 [Nicotiana tabacum]
Sequence

MAEEDDEFRSLTDPESDPDSIPMFFDRNRHICYLEMMLELIPSPYQSQEINRLTLAYFAI
SGLDILRALDRVDKEGVINWVLSLQAHPRDEAELSNGQFYGFHGSRSSQFQSNENGDAIP
NGSHLASTYCALSILKTLGYDFSLLDSTSILKSMKNLQQPDGSFMPIHSGAETDLRFVYC
AAAISSMLENWSGIDKEKAKEYIINCQSYDGGFGLTPGSESHGGATYCAVASLKLMGLIE
DDILSKSVSSCFINVPMLLDWSLQYGGFGKIPEQLPDLYHAYYGFCAFSLLGEADLSSFC
VELGITNGACTRL

Transcript Sequence

Gene sequence data has not been registered.